BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011B04LP1|AL426154
(815 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1668 1581 0.0
>3x_Contig1668
Length = 13429
Score = 1581 bits (793), Expect = 0.0
Identities = 807/815 (99%)
Strand = Plus / Minus
Query: 1 atccattactaagttccaatatattcakctccggagtcgctagctatcgtcatgctaacg 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 4966 atccattactaagttccaatatattcagctccggagtcgctagctatcgtcatgctaacg 4907
Query: 61 gagttcggactgtgaatttcacgggagatattccagaacctccaaaccaaacatctcaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4906 gagttcggactgtgaatttcacgggagatattccagaacctccaaaccaaacatctcaaa 4847
Query: 121 catcctcgtccaatgttgattcaacaactactaattcacagccaacttctgctaatattg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4846 catcctcgtccaatgttgattcaacaactactaattcacagccaacttctgctaatattg 4787
Query: 181 catcgcacacagaggaatcctccaacaaccatgcagaaaaccctgaaattagtgcagtgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4786 catcgcacacagaggaatcctccaacaaccatgcagaaaaccctgaaattagtgcagtgc 4727
Query: 241 atacggagcgggcaacttctgatggaaaccagaataatgttacggatgctaccaacgaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4726 atacggagcgggcaacttctgatggaaaccagaataatgttacggatgctaccaacgaat 4667
Query: 301 gatatcgtcaaataaccaaaaadagatctaacaccaatcttatcaccgcaaagaagacta 360
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 4666 gatatcgtcaaataaccaaaaaaagatctaacaccaatcttatcaccgcaaagaagacta 4607
Query: 361 attgtataagccatcaactatcgttccgcatagtatacataatgtacgttcgttatctat 420
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 4606 attgtataagccatcaactatcgttccgcatagtatacataatgtacgtacgttatctat 4547
Query: 421 cttaatattwatgtccttccgtctttwaactctctgcagctgtttctatttgatatttaa 480
||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 4546 cttaatattaatgtccttccgtctttaaactctctgcagctgtttctatttgatatttaa 4487
Query: 481 gaagactcatgaaatcattgaaaaatcacaagttacatgaatcaagcatatttcaatggg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4486 gaagactcatgaaatcattgaaaaatcacaagttacatgaatcaagcatatttcaatggg 4427
Query: 541 agaggttttgaatcataacaacaattgaccaggaatcaactaggtcgaataggatagcag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4426 agaggttttgaatcataacaacaattgaccaggaatcaactaggtcgaataggatagcag 4367
Query: 601 aragtaacgaaagcsatcataaagcaagatgttaaagtatcatatgakaggctatagtgg 660
| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 4366 aaagtaacgaaagcaatcataaagcaagatgttaaagtatcatatgaaaggctatagtgg 4307
Query: 661 ttacggtgtagcttactcacctttctacgataacaaacttgcggttgcttcaggttctaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4306 ttacggtgtagcttactcacctttctacgataacaaacttgcggttgcttcaggttctaa 4247
Query: 721 ctttggtttggttggtaatggaaaactaataattttagacataatgccaaatggtcagtt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4246 ctttggtttggttggtaatggaaaactaataattttagacataatgccaaatggtcagtt 4187
Query: 781 agtagagtctaattctttcctaactcaagatgggc 815
|||||||||||||||||||||||||||||||||||
Sbjct: 4186 agtagagtctaattctttcctaactcaagatgggc 4152
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5105
Number of Sequences: 1807
Number of extensions: 5105
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 815
length of database: 10,358,551
effective HSP length: 16
effective length of query: 799
effective length of database: 10,329,639
effective search space: 8253381561
effective search space used: 8253381561
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)